####################################### ### Log file for Plant Disease DDRP ### ####################################### BASE DIR: /data/PRISM/ WORKING DIR: /data/PRISM/2026 PARAMETER AND SETTINGS SETUP: getting parameters to use in model Species params: /home/wea/DDRP/spp_params/BROT.params Reading params for species: BROT Fullname: Brown_rot METADATA: creating metadata file for all inputs used in model Done writing metadata file PRISM DATA PROCESSING Sampling every 30 days between 20260101 and 20260623 Sampling also includes today (20260619) 3 days in future (20260622) and 4 days in future (20260623) Finished loading PRISM files for 174 days Creating template file for CONUS Splitting template into 4 tiles Cropping tmax, tmin, tmean, tdmean and ppt tiles for CONUS Done cropping climate data DAILY TIME STEP Starting daily time step Saving raster brick: DDtotal_tile_3.tif - Degree day accum. for all 10 dates Saving raster brick: Lifestage_tile_3.tif - Lifestage for all 10 dates Saving raster brick: NumGen_tile_3.tif - No. of gens for all 10 dates Saving raster brick: StageCount_tile_3.tif - Generation and stage for all 10 dates Saving raster brick: CumDDs_tile_3.tif - Plant disease degree day unit accum. for all 10 dates Saving raster brick: DDtotal_tile_4.tif - Degree day accum. for all 10 dates Saving raster brick: Cum_Inf_Risk_Total_tile_3.tif - Plant disease cum. infection risk for all 10 dates Saving raster brick: Cum_Inf_Risk_1day_tile_3.tif - Cum inf risk 1day Saving raster brick: Lifestage_tile_4.tif - Lifestage for all 10 dates Saving raster brick: Cum_Inf_Risk_2day_tile_3.tif - Cum inf risk 2day Saving raster brick: DDtotal_tile_1.tif - Degree day accum. for all 10 dates Saving raster brick: Cum_Inf_Risk_3day_tile_3.tif - Cum inf risk 3day Saving raster brick: Cum_Inf_Risk_4day_tile_3.tif - Cum inf risk 4day Saving raster brick: NumGen_tile_4.tif - No. of gens for all 10 dates Saving raster brick: Lifestage_tile_1.tif - Lifestage for all 10 dates Saving raster brick: StageCount_tile_4.tif - Generation and stage for all 10 dates Saving raster brick: NumGen_tile_1.tif - No. of gens for all 10 dates Saving raster brick: DDtotal_tile_2.tif - Degree day accum. for all 10 dates Saving raster brick: CumDDs_tile_4.tif - Plant disease degree day unit accum. for all 10 dates Saving raster brick: StageCount_tile_1.tif - Generation and stage for all 10 dates Saving raster brick: Lifestage_tile_2.tif - Lifestage for all 10 dates Saving raster brick: Cum_Inf_Risk_Total_tile_4.tif - Plant disease cum. infection risk for all 10 dates Saving raster brick: NumGen_tile_2.tif - No. of gens for all 10 dates Saving raster brick: CumDDs_tile_1.tif - Plant disease degree day unit accum. for all 10 dates Saving raster brick: Cum_Inf_Risk_1day_tile_4.tif - Cum inf risk 1day Saving raster brick: Cum_Inf_Risk_2day_tile_4.tif - Cum inf risk 2day Saving raster brick: Cum_Inf_Risk_3day_tile_4.tif - Cum inf risk 3day Saving raster brick: StageCount_tile_2.tif - Generation and stage for all 10 dates Saving raster brick: Cum_Inf_Risk_4day_tile_4.tif - Cum inf risk 4day Saving raster brick: Cum_Inf_Risk_Total_tile_1.tif - Plant disease cum. infection risk for all 10 dates Saving raster brick: CumDDs_tile_2.tif - Plant disease degree day unit accum. for all 10 dates Saving raster brick: Cum_Inf_Risk_1day_tile_1.tif - Cum inf risk 1day Saving raster brick: Cum_Inf_Risk_2day_tile_1.tif - Cum inf risk 2day Saving raster brick: Cum_Inf_Risk_3day_tile_1.tif - Cum inf risk 3day Saving raster brick: Cum_Inf_Risk_4day_tile_1.tif - Cum inf risk 4day Saving raster brick: Cum_Inf_Risk_Total_tile_2.tif - Plant disease cum. infection risk for all 10 dates Saving raster brick: Cum_Inf_Risk_1day_tile_2.tif - Cum inf risk 1day Saving raster brick: Cum_Inf_Risk_2day_tile_2.tif - Cum inf risk 2day Saving raster brick: Cum_Inf_Risk_3day_tile_2.tif - Cum inf risk 3day Saving raster brick: Cum_Inf_Risk_4day_tile_2.tif - Cum inf risk 4day Daily loop done (run time = 0.32 min) FINAL ANALYSES AND MAP PRODUCTION Merging tiles for CONUS Merged Cum_Inf_Risk_4day tiles Merged Cum_Inf_Risk_1day tiles Merged Cum_Inf_Risk_2day tiles Merged Cum_Inf_Risk_3day tiles Merged StageCount tiles Merged DDtotal tiles Merged Cum_Inf_Risk_Total tiles Merged Lifestage tiles Merged CumDDs tiles Merged NumGen tiles Done merging and deleting tiles ### SUMMARY MAPS: DDtotal, CumDDs, Total Inf. Risk, 3-day Inf. Risk, 2-day Inf. Risk, Lifestage, and No. of Gens Saving summary map: Misc_output/DDtotal_20260130.png - Number of accum. degree-days on 01/30/2026 Saving summary map: Misc_output/DDtotal_20260623.png - Number of accum. degree-days on 06/23/2026 Saving summary map: Misc_output/DDtotal_20260620.png - Number of accum. degree-days on 06/20/2026 Saving summary map: Misc_output/DDtotal_20260430.png - Number of accum. degree-days on 04/30/2026 Saving summary map: Misc_output/DDtotal_20260621.png - Number of accum. degree-days on 06/21/2026 Saving summary map: Misc_output/DDtotal_20260622.png - Number of accum. degree-days on 06/22/2026 Saving summary map: Misc_output/DDtotal_20260530.png - Number of accum. degree-days on 05/30/2026 Saving summary map: Misc_output/DDtotal_20260301.png - Number of accum. degree-days on 03/01/2026 Saving summary map: Misc_output/DDtotal_20260619.png - Number of accum. degree-days on 06/19/2026 Saving summary map: Misc_output/DDtotal_20260331.png - Number of accum. degree-days on 03/31/2026 Saving summary map: Misc_output/Cum_DDs_20260130.png - Number of accum. plant disease degree-days on 01/30/2026 Saving summary map: Misc_output/Cum_DDs_20260301.png - Number of accum. plant disease degree-days on 03/01/2026 Saving summary map: Misc_output/Cum_DDs_20260623.png - Number of accum. plant disease degree-days on 06/23/2026 Saving summary map: Misc_output/Cum_DDs_20260620.png - Number of accum. plant disease degree-days on 06/20/2026 Saving summary map: Misc_output/Cum_DDs_20260621.png - Number of accum. plant disease degree-days on 06/21/2026 Saving summary map: Misc_output/Cum_DDs_20260622.png - Number of accum. plant disease degree-days on 06/22/2026 Saving summary map: Misc_output/Cum_DDs_20260619.png - Number of accum. plant disease degree-days on 06/19/2026 Saving summary map: Misc_output/Cum_DDs_20260331.png - Number of accum. plant disease degree-days on 03/31/2026 Saving summary map: Misc_output/Cum_DDs_20260430.png - Number of accum. plant disease degree-days on 04/30/2026 Saving summary map: Misc_output/Cum_DDs_20260530.png - Number of accum. plant disease degree-days on 05/30/2026 Saving summary map: Misc_output/Cum_Inf_Risk_Total_20260130.png - Number of accum. infection risk units on 01/30/2026 Saving summary map: Misc_output/Cum_Inf_Risk_Total_20260301.png - Number of accum. infection risk units on 03/01/2026 Saving summary map: Misc_output/Cum_Inf_Risk_Total_20260331.png - Number of accum. infection risk units on 03/31/2026 Saving summary map: Cum_Inf_Risk_Total_20260623.png - Number of accum. infection risk units on 06/23/2026 Saving summary map: Misc_output/Cum_Inf_Risk_Total_20260620.png - Number of accum. infection risk units on 06/20/2026 Saving summary map: Misc_output/Cum_Inf_Risk_Total_20260621.png - Number of accum. infection risk units on 06/21/2026 Saving summary map: Misc_output/Cum_Inf_Risk_Total_20260430.png - Number of accum. infection risk units on 04/30/2026 Saving summary map: Misc_output/Cum_Inf_Risk_Total_20260622.png - Number of accum. infection risk units on 06/22/2026 Saving summary map: Misc_output/Cum_Inf_Risk_Total_20260619.png - Number of accum. infection risk units on 06/19/2026 Saving summary map: Misc_output/Cum_Inf_Risk_Total_20260530.png - Number of accum. infection risk units on 05/30/2026 Saving summary map: Misc_output/Lifestage_20260130.png - Lifestage on 01/30/2026 Saving summary map: Misc_output/Lifestage_20260301.png - Lifestage on 03/01/2026 Saving summary map: Cum_Inf_Risk_4day_20260623.png - Number of accum. plant disease degree-days 4 days ago to current day Saving summary map: Cum_Inf_Risk_2day_20260621.png - Number of accum. plant disease degree-days 2 days ago to current day Saving summary map: Cum_Inf_Risk_1day_20260620.png - Number of accum. plant disease degree-days 1 days ago to current day Saving summary map: Cum_Inf_Risk_3day_20260622.png - Number of accum. plant disease degree-days 3 days ago to current day Saving summary map: Misc_output/Lifestage_20260331.png - Lifestage on 03/31/2026 Saving summary map: Misc_output/Lifestage_20260619.png - Lifestage on 06/19/2026 Saving summary map: Misc_output/Lifestage_20260430.png - Lifestage on 04/30/2026 Saving summary map: Misc_output/Lifestage_20260530.png - Lifestage on 05/30/2026 Saving summary map: Misc_output/NumGen_20260130.png - Numbers of generations on 01/30/2026 Saving summary map: Misc_output/NumGen_20260301.png - Numbers of generations on 03/01/2026 Saving summary map: Misc_output/Lifestage_20260623.png - Lifestage on 06/23/2026 Saving summary map: Misc_output/Lifestage_20260621.png - Lifestage on 06/21/2026 Saving summary map: Misc_output/NumGen_20260331.png - Numbers of generations on 03/31/2026 Saving summary map: Misc_output/Lifestage_20260622.png - Lifestage on 06/22/2026 Saving summary map: Misc_output/NumGen_20260619.png - Numbers of generations on 06/19/2026 Saving summary map: Misc_output/Lifestage_20260620.png - Lifestage on 06/20/2026 Saving summary map: Misc_output/NumGen_20260530.png - Numbers of generations on 05/30/2026 Saving summary map: Misc_output/NumGen_20260430.png - Numbers of generations on 04/30/2026 Saving summary map: Misc_output/NumGen_20260623.png - Numbers of generations on 06/23/2026 Saving summary map: Misc_output/NumGen_20260621.png - Numbers of generations on 06/21/2026 Saving summary map: Misc_output/NumGen_20260622.png - Numbers of generations on 06/22/2026 Saving summary map: Misc_output/NumGen_20260620.png - Numbers of generations on 06/20/2026 Saving summary map: Misc_output/StageCount_20260130.png - Stage count on 01/30/2026 Saving summary map: Misc_output/StageCount_20260301.png - Stage count on 03/01/2026 Saving summary map: Misc_output/StageCount_20260331.png - Stage count on 03/31/2026 Saving summary map: Misc_output/StageCount_20260430.png - Stage count on 04/30/2026 Saving summary map: Misc_output/StageCount_20260530.png - Stage count on 05/30/2026 Saving summary map: Misc_output/StageCount_20260622.png - Stage count on 06/22/2026 Saving summary map: Misc_output/StageCount_20260623.png - Stage count on 06/23/2026 Saving summary map: Misc_output/StageCount_20260620.png - Stage count on 06/20/2026 Saving summary map: Misc_output/StageCount_20260619.png - Stage count on 06/19/2026 Saving summary map: Misc_output/StageCount_20260621.png - Stage count on 06/21/2026 Done with DDtotal, CumDDs, CumDDLW, Lifesetage, NumGen, and Generation and Stage maps ### Done w/ processing of daily loop results ### Run time for analyses and map production = 1.66 min Renamed all final PNG files to include BROT in file name MODEL RUN DONE Run time for entire model = 2.73 min